If they go anywhere, I can't find it. However, I have secured my botch wires with some hot-melt glue, so I can't get to every contact on the board anymore.
Resistor pack R9 pin 4, 5 not used? Pin 1,2,3 go to the encoder. Pin 1 is bottom left I am using as a ref.
OK where does MCU pin 11 PA1 go? Seems to go to R10 pin2
U2 EEPROM pin 1 SCL goes to MCU pin 42 or 43?
U2 EEPROM pin 3 SDA goes to MCU pin 42 or 43 or 11?
Still not sure where MCU pin 2, 43 go then as we have two I2C I/O but three traces.
Pin 43 goes off to the vertical header above the beeper. I think it might be part of a programming header or future extension. If you look at the attached photo and the order of the through-hole pads therein, then:
Hole 1 connects to pin 2 and 5 of the MCU (or ground, whichever).
Hole 2 goes to pin 42 (PB6).
Hole 3 goes to pin 43 (PB7).
Hole 4 goes to ground again.
Hole 5 goes to pin 38 (PA15).
Hole 6 goes to pin 39 (PB3).
Hole 7 goes to pin 40 (PB4).
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